whop.eg.selectOrganism

organismname

dontload

Whether to install the database, if it does not exist locally

install.if.missing


Select the organism to query with subsequent whop.eg calls and load the appropiate database(s).


Provides very fast access to whole genome, population scale variation data
from VCF files and sequence data from FASTA-formatted files.
It also reads in alignments from FASTA, Phylip, MAF and other file formats.
Provides easy-to-use interfaces to genome annotation from UCSC and Bioconductor and gene ontology data
from AmiGO and is capable to read, modify and write PLINK .PED-format pedigree files.

whop.eg.selectOrganism: Select the organism to query with subsequent whop.eg calls and load the appropiate database(s).

Description

Usage

Arguments

Value