ascorbate

log2 transformed samples using Illumina HumanWG-6 chips, 3 of which were controls, and three of which were sampled after the addition of ascorbate to the medium. Details and data available by searching `ascorbate' at www.stemformatics.org. This dataset is a random subset of 5000 genes for smaller package size and faster example times

datasets

Simple method for comparison of gene
expression generated across different experiments, and on
different platforms; that does not require global
renormalization, and is not restricted to comparison of
identical probes. YuGene works on a range of microarray dataset
distributions, such as between manufacturers. The resulting
output allows direct comparisons of gene expression between
experiments and experimental platforms.

Florian Rohart

YuGene

A Simple Approach to Scale Gene Expression Data Derived from
Different Platforms for Integrated Analyses

ascorbate function

A list containing the following components:<dl class="dl-horizontal">
 <dt><code>gene</code></dt><dd>data frame with 48803 rows and 6 columns. 
 	The expression levels of 48803 transcripts for the 6 subjects.</dd>
 <dt><code>condition</code></dt><dd>a vector of 6 elements indicating the condition of each subject ('4ng.ml' or '100ng.ml')</dd>
 </dl>

ascorbate: Ascorbate Experiment

Description

Usage

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References