Usage
plotCombination2genes(probesetId1 = NULL, probesetId2 = NULL, geneSymbol1 = NULL,
geneSymbol2 = NULL, object, groups, addLegend = TRUE, legendPos = "topleft", probe2gene = TRUE, colvec = NULL, ...)
Arguments
probesetId1
First probeset id, plotted in the x-axis
probesetId2
Second probeset id, plotted in the y-axis
geneSymbol1
First gene symbol, plotted in the x-axis
geneSymbol2
Second gene symbol, plotted in the y-axis
object
ExpressionSet object for the experiment
groups
string containing the name of the grouping variable
addLegend
Logical value to indicate whether a legend needs to be drawn.
legendPos
Position on the graph where to put the legend
probe2gene
should the probeset be translated to a gene symbol
(used for the default title of the plot)
colvec
a character vector of colors. If not specified it will be
automatically generated by a4palette
...
This allows to specify typical arguments in the plot
function