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Tests the components of covariance with permutation processes described by Excoffier et al. (1992).
# S3 method for amova randtest(xtest, nrepet = 99, ...)
returns an object of class krandtest or randtest
krandtest
randtest
an object of class amova
amova
the number of permutations
further arguments passed to or from other methods
Sandrine Pavoine pavoine@mnhn.fr
Excoffier, L., Smouse, P.E. and Quattro, J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479--491.
data(humDNAm) amovahum <- amova(humDNAm$samples, sqrt(humDNAm$distances), humDNAm$structures) amovahum randtesthum <- randtest(amovahum, 49) plot(randtesthum)
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