njplot

This data set describes the phylogeny of 36 bacteria as reported by Perrière and Gouy (1996). It also gives the GC rate corresponding to these 36 species.

datasets

Tools for multivariate data analysis. Several methods are provided for the analysis (i.e., ordination) of one-table (e.g., principal component analysis, correspondence analysis), two-table (e.g., coinertia analysis, redundancy analysis), three-table (e.g., RLQ analysis) and K-table (e.g., STATIS, multiple coinertia analysis). The philosophy of the package is described in Dray and Dufour (2007) <doi:10.18637/jss.v022.i04>.

Aurélie Siberchicot

ade4

Analysis of Ecological Data: Exploratory and Euclidean Methods
in Environmental Sciences

njplot function

<code>njplot</code> is a list containing the 2 following objects:<dl>
 <dt>tre</dt>
<dd>is a character string giving the fission tree in Newick format.</dd>
 
 <dt>tauxcg</dt>
<dd>is a numeric vector that gives the CG rate of the 36
 species.</dd> 
</dl>

Format

Phylogeny and trait of bacteria — njplot

<code>njplot</code> is a list containing the 2 following objects:<dl>
 <dt>tre</dt>
<dd>is a character string giving the fission tree in Newick format.</dd>
 
 <dt>tauxcg</dt>
<dd>is a numeric vector that gives the CG rate of the 36
 species.</dd>

 
</dl>

njplot: Phylogeny and trait of bacteria

Description

Usage

Arguments

Format

References

Examples