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adegenet (version 1.0-0)
Genetic data handling for multivariate analysis using ade4
Description
Classes and functions for genetic data analysis within the multivariate framework.
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Install
install.packages('adegenet')
Monthly Downloads
11,001
Version
1.0-0
License
GPL version 2 or newer
Maintainer
Thibaut Jombart
Last Published
January 26th, 2023
Functions in adegenet (1.0-0)
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Auxiliary functions
Utilities functions for adegenet objects
dist.genpop
Genetic distances between populations
adegenet-package
Genetic data handling for multivariate analysis
import
Conversion function for adegenet
export
Conversion functions from adegenet to other R packages
gstat.randtest
Goudet's G-statistic Monte Carlo test for genind object
genind
adegenet class for individual genotypes
genpop
adegenet class for allele counts in populations
microbov
Microsatellites genotypes of 15 cattle breeds
HWE.test.genind
Hardy-Weinberg Equilibrium test for multilocus data
nancycats
Microsatellites genotypes of 237 cats from 17 colonies of Nancy (France)
makefreq
Function to generate allelic frequencies