indInfo-class

popInfo-class

gen-class

callOrNULL-class

charOrNULL-class

factorOrNULL-class

intOrNum-class

listOrNULL-class

intOrNULL-class

dfOrNULL-class

formOrNULL-class

These virtual classes are only for internal use in adegenet

classes

virtualClasses

Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

Thibaut Jombart

adegenet

Exploratory Analysis of Genetic and Genomic Data

virtualClasses function

A virtual Class: No objects may be created from it.

Objects from the Class

Virtual classes for adegenet

virtualClasses: Virtual classes for adegenet

Description

Arguments

Objects from the Class