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adegenet (version 2.1.10)

adegenetWeb: Functions to access online resources for adegenet

Description

These functions simply open websites or documents available online providing resources for adegenet.

Usage

adegenetWeb()

adegenetTutorial( which = c("basics", "spca", "dapc", "genomics", "strata", "snapclust") )

adegenetIssues()

Arguments

which

a character string indicating which tutorial to open (see details)

Details

  • adegenetWeb opens adegenet's website

  • adegenetTutorial opens adegenet tutorials

  • adegenetIssues opens the issue page on github; this is used to report a bug or post a feature request.

Available tutorials are:

  • 'basics': general introduction to adegenet; covers basic data structures, import/export, handling, and a number of population genetics methods

  • 'spca': spatial genetic structures using the spatial Principal Component Analysis

  • 'dapc': population structure using the Discriminant Analysis of Principal Components

  • 'genomics': handling large genome-wide SNP data using adegenet

  • 'strata': introduction to hierarchical population structure in adegenet

  • 'snapclust': introduction to fast maximum-likelihood genetic clustering using snapclust