S1.matchA class for the creation and display of paired scores.
S1.match objects can be created by calls of the form new("S1.match", ...).
The regular usage in this package is to use the s1d.match function.
dataa list containing data or data's name.
score: the displayed values in the form of a numeric vector, a name or a matching call.
labels: the labels' names drawn for each score.
at: the index value.
frame: a positive or null integer. It is the number of the frame containing the data (used
with sys.frame(..., env = data$frame)). Only if the data are not stored (i.e. data$storeData = FALSE).
storeData: a logical indicating if the data should be stored in the returned object.
If FALSE, only the names of the data arguments are stored.
trellis.para list of parameters for lattice call.
It will be passed directly to par.settings arguments of the lattice function.
adeg.para list of graphical parameters, corresponding to the ones
given by adegpar() function.
lattice.calla list to create the trellis object.
g.argsa list containing some method parameters linked with the created object of ADEg.S1 class.
statsa list of internal preliminary calculations
s.misca list of some others internal parameters.
The specific slot for S1.match objects is:
rug: an index value indicating where the rugs are drawn.
Callan object of class call
Class ADEg.S1, directly.
Class ADEg, by class ADEg.S1, distance 2.
Class ADEgORtrellis, by class ADEg.S1, distance 3.
Class ADEgORADEgSORtrellis, by class ADEg.S1, distance 3.
The methods of the father classes "ADEg.S1" and "ADEg" can be used by inheritance.
The specific methods for S1.match are:
signature(object = "S1.match"):
calls the parent method (prepare for ADEg.S1) and modifies some graphical parameters used by default.
signature(object = "S1.match"):
draws score points and matching segments and labels.
Alice Julien-Laferriere, Aurelie Siberchicot aurelie.siberchicot@univ-lyon1.fr and Stephane Dray
ADEg
ADEg.S1
s1d.match