graphs_2_0


Use <code><a rd-options="" href="/link/vector_to_graph?package=admixturegraph&version=1.0.2" data-mini-rdoc="admixturegraph::vector_to_graph">vector_to_graph</a></code> on the <code>n</code>:th row to access the <code>n</code>:th graph
as an <code><a rd-options="" href="/link/agraph?package=admixturegraph&version=1.0.2" data-mini-rdoc="admixturegraph::agraph">agraph</a></code> object.


datasets

Implements tools for building and visualising admixture graphs
and for extracting equations from them. These equations can be compared to f-
statistics obtained from data to test the consistency of a graph against data --
for example by comparing the sign of f_4-statistics with the signs predicted by
the graph -- and graph parameters (edge lengths and admixture proportions) can
be fitted to observed statistics.

Thomas Mailund

admixturegraph

Admixture Graph Manipulation and Fitting

graphs_2_0 function

Format

Calculated using <code><a rd-options="" href="/link/all_graphs?package=admixturegraph&version=1.0.2" data-mini-rdoc="admixturegraph::all_graphs">all_graphs</a></code> and <code><a rd-options="" href="/link/graph_to_vector?package=admixturegraph&version=1.0.2" data-mini-rdoc="admixturegraph::graph_to_vector">graph_to_vector</a></code>.

Source


Use <code><a rd-options='' href='vector_to_graph'>vector_to_graph</a></code> on the <code>n</code>:th row to access the <code>n</code>:th graph
as an <code><a rd-options='' href='agraph'>agraph</a></code> object.


Calculated using <code><a rd-options='' href='all_graphs'>all_graphs</a></code> and <code><a rd-options='' href='graph_to_vector'>graph_to_vector</a></code>.

graphs_2_0: Admixture graphs of 2 leaves and 0 admixture events compressed into vectors

Description

Usage

Arguments

Format

Source