print.agraph_fit


Prints the value of <code><a rd-options="" href="/link/cost_function?package=admixturegraph&version=1.0.2" data-mini-rdoc="admixturegraph::cost_function">cost_function</a></code> of the fitted graph, and complains
if some or all of the admixture proportions aren't trurly fitted.
Note: the admixture proportion not being trurly fitted does not necessarily mean that
there is no evidence of an admix event!


Implements tools for building and visualising admixture graphs
and for extracting equations from them. These equations can be compared to f-
statistics obtained from data to test the consistency of a graph against data --
for example by comparing the sign of f_4-statistics with the signs predicted by
the graph -- and graph parameters (edge lengths and admixture proportions) can
be fitted to observed statistics.

Thomas Mailund

admixturegraph

Admixture Graph Manipulation and Fitting

print.agraph_fit function


Prints the value of <code><a rd-options='' href='cost_function'>cost_function</a></code> of the fitted graph, and complains
if some or all of the admixture proportions aren't trurly fitted.
Note: the admixture proportion not being trurly fitted does not necessarily mean that
there is no evidence of an admix event!


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print.agraph_fit: Print function for the fitted graph.

Description

Usage

Arguments

See Also