getCols

A design matrix, usually produced by a call to
<code>model.matrix</code>.

design

A contrasts matrix, either produced by hand or as a result
of a call to <code><a href="/link/makeContrasts?package=affy&version=1.50.0&to=limma" rd-options="limma" data-mini-rdoc="limma::makeContrasts">makeContrasts</a></code>

contrast

A function to determine the correct ordering of contrasts for
<code>vennSelect</code>. This is an internal function and should not be called by
the end user

internal

The package contains functions for exploratory
oligonucleotide array analysis. The dependence on tkWidgets
only concerns few convenience functions. 'affy' is fully
functional without it.

Rafael A Irizarry

affy

Methods for Affymetrix Oligonucleotide Arrays

getCols function

A contrasts matrix, either produced by hand or as a result
of a call to <code><a href="makeContrasts" rd-options="limma">makeContrasts</a></code>

getCols: Correct Ordering of Contrasts

Description

Usage

Arguments

Value