airr (version 1.5.0)

validate_tabular: Validate tabular AIRR data

Description

validate_tabular validates compliance of the contents of a data.frame to the AIRR standards.

Usage

validate_tabular(data, schema)
validate_rearrangement(data)

Value

Returns TRUE if the input data is compliant and

FALSE if not.

Arguments

data

data.frame of tabular data to validate.

schema

Schema object defining the data standard of the table.

Details

validate_rearrangement validates the standards compliance of AIRR Rearrangement data stored in a data.frame

Examples

# Get path to the rearrangement-example file
file <- system.file("extdata", "rearrangement-example.tsv.gz", package="airr")

# Load data file
df <- read_rearrangement(file)

# Validate a data.frame against the Rearrangement schema
validate_rearrangement(df)