read_h5ad

Read <code>.h5ad</code>-formatted hdf5 file.

A 'reticulate' wrapper for the Python package 'anndata'.
Provides a scalable way of keeping track of data and learned
annotations.  Used to read from and write to the h5ad file format.

Robrecht Cannoodt

anndata

'anndata' for R

Philipp Angerer

Alex Wolf

Isaac Virshup

Sergei Rybakov

read_h5ad function

<dl><dt>filename</dt>
<dd>File name of data file.</dd>
<dt>backed</dt>
<dd>If <code>'r'</code>, load <code>~anndata.AnnData</code> in <code>backed</code> mode instead of fully loading it into memory (<code>memory</code> mode). If you want to modify backed attributes of the AnnData object, you need to choose <code>'r+'</code>.</dd></dl>

Arguments

read_h5ad — read_h5ad

<dl>

<dt>filename</dt>
<dd>File name of data file.</dd>


<dt>backed</dt>
<dd>If <code>'r'</code>, load <code>~anndata.AnnData</code> in <code>backed</code> mode instead of fully loading it into memory (<code>memory</code> mode). If you want to modify backed attributes of the AnnData object, you need to choose <code>'r+'</code>.</dd>

</dl>

read_h5ad: read_h5ad

Description

Usage

Arguments

Examples