convertUnits.AffymetrixCdfFile

AffymetrixCdfFile.convertUnits

convertUnits,AffymetrixCdfFile-method

Gets and validates unit indices either by unit names or by a unit indices (validation).

methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

Henrik Bengtsson

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

James Bullard

Kasper Hansen

Pierre Neuvial

Elizabeth Purdom

Mark Robinson

Ken Simpson

convertUnits.AffymetrixCdfFile function

<dl> <dt>units</dt>
<dd>Either a <code><a href="/link/character?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::character">character</a></code> <code><a href="/link/vector?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::vector">vector</a></code> with unit names, or an <code><a href="/link/integer?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::integer">integer</a></code>
 <code><a href="/link/vector?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::vector">vector</a></code> with unit indices to be validated.
 If <code><a href="/link/NULL?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::NULL">NULL</a></code>, all unit indices are returned.</dd> <dt>keepNULL</dt>
<dd>If <code><a href="/link/TRUE?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::TRUE">TRUE</a></code>, <code><a href="/link/NULL?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::NULL">NULL</a></code> returns <code><a href="/link/NULL?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::NULL">NULL</a></code>.</dd> <dt>...</dt>
<dd>Not used.</dd></dl>

Arguments

Gets and validates unit indices — convertUnits.AffymetrixCdfFile

<dl>

 <dt>units</dt>
<dd>Either a <code><a href='https://rdrr.io/r/base/character.html'>character</a></code> <code><a href='https://rdrr.io/r/base/vector.html'>vector</a></code> with unit names, or an <code><a href='https://rdrr.io/r/base/integer.html'>integer</a></code>
 <code><a href='https://rdrr.io/r/base/vector.html'>vector</a></code> with unit indices to be validated.
 If <code><a href='https://rdrr.io/r/base/NULL.html'>NULL</a></code>, all unit indices are returned.</dd>

 <dt>keepNULL</dt>
<dd>If <code><a href='https://rdrr.io/r/base/logical.html'>TRUE</a></code>, <code><a href='https://rdrr.io/r/base/NULL.html'>NULL</a></code> returns <code><a href='https://rdrr.io/r/base/NULL.html'>NULL</a></code>.</dd>

 <dt>...</dt>
<dd>Not used.</dd>

</dl>

Gets and validates unit indices

convertUnits.AffymetrixCdfFile: Gets and validates unit indices

Description

Usage

Value

Arguments

See Also