getFirmaSet.FirmaModel

FirmaModel.getFirmaSet

getFirmaSet,FirmaModel-method

FirmaModel.getFirmaScores

getFirmaScores.FirmaModel

getFirmaScores,FirmaModel-method

Gets the set of FIRMA results for this model.
 There is one chip-effect file per array.

methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

Henrik Bengtsson

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

James Bullard

Kasper Hansen

Pierre Neuvial

Elizabeth Purdom

Mark Robinson

Ken Simpson

getFirmaSet.FirmaModel function

<dl> <dt>...</dt>
<dd>Not used.</dd> <dt>verbose</dt>
<dd>A <code><a href="/link/logical?package=aroma.affymetrix&version=3.2.2" data-mini-rdoc="aroma.affymetrix::logical">logical</a></code> or a <code>Verbose</code>.</dd></dl>

Arguments

Gets the set of FIRMA results for this model — getFirmaSet.FirmaModel

<dl>

 <dt>...</dt>
<dd>Not used.</dd>

 <dt>verbose</dt>
<dd>A <code><a href='https://rdrr.io/r/base/logical.html'>logical</a></code> or a <code>Verbose</code>.</dd>

</dl>

Gets the set of FIRMA results for this model

getFirmaSet.FirmaModel: Gets the set of FIRMA results for this model

Description

Usage

Value

Arguments

See Also