getResiduals.QualityAssessmentModel

QualityAssessmentModel.getResiduals

getResiduals,QualityAssessmentModel-method

Calculates the residuals from a probe-level model.

methods

internal

A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system.  The only parameter that limits the number of chips that can be processed is the amount of available disk space.  The Aroma Framework has successfully been used in studies to process tens of thousands of arrays.  This package has actively been used since 2006.

Henrik Bengtsson

aroma.affymetrix

Analysis of Large Affymetrix Microarray Data Sets

James Bullard

Kasper Hansen

Pierre Neuvial

Elizabeth Purdom

Mark Robinson

Ken Simpson

getResiduals.QualityAssessmentModel function

<dl> <dt>...</dt>
<dd>Additional arguments passed <code>byPath()</code> of
 <code>QualityAssessmentSet</code>.</dd></dl>

Arguments

Calculates the residuals from a probe-level model — getResiduals.QualityAssessmentModel

<dl>

 <dt>...</dt>
<dd>Additional arguments passed <code>byPath()</code> of
 <code>QualityAssessmentSet</code>.</dd>

</dl>

Calculates the residuals from a probe-level model

getResiduals.QualityAssessmentModel: Calculates the residuals from a probe-level model

Description

Usage

Value

Arguments

See Also