artemis (version 1.1.1)

plot.eDNA_p_detect: Plot p(detect)

Description

Plot the p(detect eDNA)

Usage

# S3 method for eDNA_p_detect
plot(
  x,
  y,
  probs = c(0.025, 0.975),
  ylim = c(0, 1),
  point_size = 2.5,
  n_breaks = 5,
  error_width = rel(1.25),
  ...
)

Arguments

x

object of class eDNA_p_detect

y

ignored

probs

probabilities for error bars when a model fit is supplied

ylim

limits on the y axis

point_size

point size for the estimated p(detect)

n_breaks

passed to pretty

error_width

the width of the ends of errorbars

...

additional args passed to plot.stanfit

Value

a ggplot object

Details

This allows the visualization of the probability of detection producted by est_p_detect. If the object includes an interval estimate, errorbars are produced with those intervals.