R
, we represent dissimilarities as the
S3
class dist
. For cross-dissimilarities and similarities, we
provide the S4
classes ar_cross_dissimilarities
and
ar_similarities
.dist
objects are the result of calling the method
dissimilarity
with one argument or any R
function
returning a S3 dist
object.
ar_cross_dissimilarity
objects are the result of calling the method
dissimilarity
with two arguments, by calls of the form
new("similarity", ...)
, or by coercion from matrix. ar_similarity
objects are the result of calling the method
affinity
, by calls of the form new("similarity", ...)
,
or by coercion from matrix.
S4
classes have a method
slot which contains the
type of measure used for calculation.dist
(in package stats
),
dissimilarity
,
affinity
.