convert_factor

Dataframe with information about functionalGroups.
Usually loaded with load_fgs().

data_fgs

Column of the dataframe which is converted to a factor.

This function is used to match the labels of the plots!

Atlantis is an end-to-end marine ecosystem modelling framework. It was originally developed in Australia by E.A. Fulton, A.D.M. Smith and D.C. Smith (2007) and has since been adopted in many marine ecosystems around the world (<http://atlantis.cmar.csiro.au>). The output of an Atlantis simulation is stored in various file formats like .netcdf and .txt and different output structures are used for the output variables like e.g. productivity or biomass. This package is used to convert the different output types to a unified format according to the "tidy-data" approach by H. Wickham (2014) <DOI:10.18637/jss.v059.i10>. Additionally, ecological metrics like for example spatial overlap of predator and prey or consumption can be calculated and visualised with this package. Due to the unified data structure it is very easy to share model output with each other and perform model comparisons.

Alexander Keth

atlantistools

Process and Visualise Output from Atlantis Models

convert_factor function

Function to convert any column with information about functional groups
to a factor whose levels use the LongName of the functional groups file. — convert_factor

convert_factor: Function to convert any column with information about functional groups to a factor whose levels use the LongName of the functional groups file.

Description

Usage

Arguments

Value

See Also