Function to plot the regimes from a simmap tree
plotRegimes(tree, col = NULL, lwd = 1, pal = rainbow, ...)A simmap tree of class phylo or simmap with a tree$maps list
A named vector of colors to assign to character states, if NULL, then colors are generated from pal
A numeric value indicating the width of the edges
A color palette function to generate colors if col=NULL
Optional arguments that are passed to plot.phylo
This function uses plot.phylo to generate coordinates and plot the tree, but plots the 'maps' element of phytools' simmap format. This provides much of the functionality of plot.phylo from the ape package. Currently, only types 'phylogram', 'unrooted', 'radial', and 'cladogram' are allowed. Phylogenies must have branch lengths.