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beadarraySNP (version 1.38.0)

reportGenotypeSegmentation: plot genomic view

Description

Create a figure that can be used for interactive work

Usage

reportGenotypeSegmentation(object, plotRaw = TRUE, subsample = NULL, panels = 0, minProbes = 10, maxY = 2, ...)

Arguments

object
class SnpSetIllumina after segmentation
plotRaw
logical
subsample
factor
panels
number of panels on a page
minProbes
minimum number of probes for a chromosome within a panel
maxY
maximum value on vertical scale within panels
...
arguments are forwrded to plot

Value

this function is used for its side effects