- ids
A character vector of one or more 4-letter PDB
codes/identifiers or 6-letter PDB-ID_Chain-ID of the files to be downloaded, or a ‘blast’
object containing ‘pdb.id’.
- path
The destination path/directory where files are to be
written.
- URLonly
logical, if TRUE a character vector containing the URL
path to the online file is returned and files are not downloaded. If
FALSE the files are downloaded.
- overwrite
logical, if FALSE the file will not be downloaded if
it alread exist.
- gzip
logical, if TRUE the gzipped PDB will be downloaded and
extracted locally.
- split
logical, if TRUE pdbsplit
funciton will be called to split pdb files
into separated chains.
- format
format of the data file: ‘pdb’ or
‘cif’ for PDB and mmCIF file formats, respectively.
- verbose
print details of the reading process.
- ncore
number of CPU cores used to do the calculation.
ncore>1
requires package ‘parallel’ installed.
- ...
extra arguments passed to pdbsplit
function.