bioRad (version 0.9.1)

write_pvolfile: Write a polar volume (pvol) object to ODIM HDF5 file

Description

Write a polar volume (pvol) object to ODIM HDF5 file

Usage

write_pvolfile(pvol, file, overwrite = FALSE, infer_dtype = FALSE)

Value

0 on success. A pvol object will be written to file in ODIM H5 format.

Arguments

pvol

An object of class pvol.

file

string. A filepath to write the pvol object to.

overwrite

logical. Overwrites existing file when TRUE.

infer_dtype

logical. By default (infer_dtype = FALSE) writes 'params' back into ODIM HDF5 files with data stored in original data types. When TRUE infers data type from the R object data type, at the cost of (heavily) inflated file sizes.

Examples

# locate example volume file:
pvolfile <- system.file("extdata", "volume.h5", package = "bioRad")

# load the file:
example_pvol <- read_pvolfile(pvolfile)

# write the file:
pvolfile_out <- paste0(tempdir(),"pvolfile_out.h5")
write_pvolfile(example_pvol, pvolfile_out)

# clean up
file.remove(pvolfile_out)