generate_sequence

the unigram alphabet. Columns are equivalent to unigrams 
and rows to particular properties.

alphabet

a list of rules describing regions.

regions

Generate a sequences using an alphabet of unigrams and set of rules.

Tools for extraction and analysis of various
n-grams (k-mers) derived from biological sequences (proteins
or nucleic acids). Contains QuiPT (quick permutation test) for fast
feature-filtering of the n-gram data.

Michal Burdukiewicz

biogram

generate_sequence: Generate sequence

Description

Usage

Arguments