biomartr (version 1.0.7)

getGENOMEREPORT: Retrieve NCBI GENOME_REPORTS file

Description

Retrieves NCBI GENOME_REPORTS file from ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/overview.txt.

Usage

getGENOMEREPORT(
  local_file = file.path(cachedir(), "_ncbi_downloads", "overview.txt")
)

Value

a tibble object with the report

Arguments

local_file

character, file path, default: file.path(cachedir(), "_ncbi_downloads", "overview.txt")

Author

Hajk-Georg Drost

Examples

if (FALSE) {
report <- getGENOMEREPORT()
report
}