BIOMOD.Model.Options-class

show,BIOMOD.Model.Options-method

object

BIOMOD.Model.Options objects are created, used and returned
by BIOMOD functions. These objects will contains for each
model support within biomod2, a set of options that
users can change. Please refer to 
<code>BIOMOD_ModelingOptions</code> for further
 details. 
- output of: <code>BIOMOD_ModelingOptions</code>
- input of: <code>BIOMOD_Modeling</code>

models

Options

Functions for species distribution modeling, calibration and evaluation,
ensemble of models, ensemble forecasting and visualization. The package permits to run
consistently up to 10 single models on a presence/absences (resp presences/pseudo-absences)
dataset and to combine them in ensemble models and ensemble projections. Some bench of other
evaluation and visualisation tools are also available within the package.

Damien Georges

biomod2

Ensemble Platform for Species Distribution Modeling

BIOMOD.Model.Options-class function

<dl><dt>object</dt>
<dd>init list of options</dd></dl>

Arguments

<dl>
<dt><code>GLM</code></dt>
<dd>"list", list of GLM supported options</dd></dl>
<dt><code>GBM</code></dt>
<dd>"list", list of GBM supported options</dd>
<dt><code>GAM</code></dt>
<dd>"list", list of GAM supported options</dd>
<dt><code>CTA</code></dt>
<dd>"list", list of CTA supported options</dd>
<dt><code>ANN</code></dt>
<dd>"list", list of ANN supported options</dd>
<dt><code>SRE</code></dt>
<dd>"list", list of SRE supported options</dd>
<dt><code>FDA</code></dt>
<dd>"list", list of FDA supported options</dd>
<dt><code>MARS</code></dt>
<dd>"list", list of MARS supported options</dd>
<dt><code>RF</code></dt>
<dd>"list", list of RF supported options</dd>
<dt><code>MAXENT.Phillips</code></dt>
<dd>"list", list of MAXENT.Phillips
supported options</dd>
<dt><code>MAXENT.Phillips.2</code></dt>
<dd>"list", list of maxnet
supported options</dd>

Slots

Author

BIOMOD_ModelingOptions outputs objects class — BIOMOD.Model.Options-class

<dl>

<dt>object</dt>
<dd>init list of options</dd>

</dl>

<dl>
<dt><code>GLM</code></dt>
<dd>"list", list of GLM supported options</dd>


<dt><code>GBM</code></dt>
<dd>"list", list of GBM supported options</dd>


<dt><code>GAM</code></dt>
<dd>"list", list of GAM supported options</dd>


<dt><code>CTA</code></dt>
<dd>"list", list of CTA supported options</dd>


<dt><code>ANN</code></dt>
<dd>"list", list of ANN supported options</dd>


<dt><code>SRE</code></dt>
<dd>"list", list of SRE supported options</dd>


<dt><code>FDA</code></dt>
<dd>"list", list of FDA supported options</dd>


<dt><code>MARS</code></dt>
<dd>"list", list of MARS supported options</dd>


<dt><code>RF</code></dt>
<dd>"list", list of RF supported options</dd>


<dt><code>MAXENT.Phillips</code></dt>
<dd>"list", list of MAXENT.Phillips
supported options</dd>


<dt><code>MAXENT.Phillips.2</code></dt>
<dd>"list", list of maxnet
supported options</dd>


</dl>

BIOMOD.Model.Options-class: BIOMOD_ModelingOptions outputs objects class

Description

Usage

Arguments

Slots

Author

Details

See Also

Examples