Learn R Programming

⚠️There's a newer version (6.0-94) of this package.Take me there.

caret (version 3.16)

Classification and Regression Training

Description

Misc functions for training and plotting classification and regression models

Copy Link

Version

Install

install.packages('caret')

Monthly Downloads

208,749

Version

3.16

License

GPL-2

Maintainer

Last Published

March 21st, 2023

Functions in caret (3.16)

findLinearCombos

Determine linear combinations in a matrix
normalize.AffyBatch.normalize2Reference

Quantile Normalization to a Reference Distribution
featurePlot

Wrapper for Lattice Plotting of Predictor Variables
dotPlot

Create a dotplot of variable importance values
mdrr

Multidrug Resistance Reversal (MDRR) Agent Data
nearZeroVar

Identification of near zero variance predictors
findCorrelation

Determine highly correlated variables
plotClassProbs

Plot Predicted Probabilities in Classification Models
applyProcessing

Data Processing on Predictor Variables (Deprecated)
createDataPartition

Data Splitting functions
BloodBrain

Blood Brain Barrier Data
caret-internal

Internal Functions
print.train

Print Method for the train Class
bagEarth

Bagged Earth
extractPrediction

Extract predictions and class probabilities from train objects
createGrid

Tuning Parameter Grid
plot.varImp.train

Plotting variable importance measures
filterVarImp

Calculation of filter-based variable importance
Alternate Affy Gene Expression Summary Methods.

Generate Expression Values from Probes
confusionMatrix

Create a confusion matrix
oil

Fatty acid composition of commercial oils
plotObsVsPred

Plot Observed versus Predicted Results in Regression and Classification Models
bagFDA

Bagged FDA
knn3

k-Nearest Neighbour Classification
format.bagEarth

Format 'bagEarth' objects
roc

Compute the points for an ROC curve
predict.knn3

Predictions from k-Nearest Neighbors
resampleSummary

Summary of resampled performance estimates
predict.bagEarth

Predicted values based on bagged Earth and FDA models
tecator

Fat, Water and Protein Content of Maat Samples
postResample

Calculates performance across resamples
spatialSign

Compute the multivariate spatial sign
preProcess

Pre-Processing of Predictors
plot.train

Plot Method for the train Class
plsda

Partial Least Squares Discriminant Analysis
pottery

Pottery from Pre-Classical Sites in Italy
summary.bagEarth

Summarize a bagged earth or FDA fit
sensitivity

Calculate Sensitivity, Specificity and predictive values
trainControl

Control parameters for train
resampleHist

Plot the resampling distribution of the model statistics
varImp

Calculation of variable importance for regression and classification models
aucRoc

Compute the area under an ROC curve
panel.needle

Needle Plot Lattice Panel
normalize2Reference

Quantile Normalize Columns of a Matrix Based on a Reference Distribution
maxDissim

Maximum Dissimilarity Sampling
train

Fit Predictive Models over Different Tuning Parameters
print.confusionMatrix

Print method for confusionMatrix
cox2

COX-2 Activity Data