cellHTS2 (version 2.36.0)

getEnVisionRawData: Read a plate file obtain from EnVision Plate Reader

Description

Import functions to read a plate file obtained from EnVision Plate Reader. These functions should be set as the import function of readPlateList through the argument importFun when reading plate result files obtained from EnVision plate reader.

Usage

getEnVisionRawData(f, p)
getEnVisionCrosstalkCorrectedData(f, p)

Arguments

f

the name of the result plate file to read.

p

capturing the additional path argument, which will actually be ignored. f is expected to be a fully resolved file path.

Value

• These functions return a list with two components. The first component should be a 'data.frame' with the following slots: well (a character vector with the well identifier in the plate) and val (the intensity values measured at each well). The second component of this list should be a character vector containing a copy of the imported input data file (such as the output of readLines). It should be suitable to be used as input for writeLines.

Details

These functions should not be called directly. Instead, they should be set as the import function of readPlateList through the argument importFun when reading plate result files obtained from an EnVision plate reader.

See Also

readPlateList

Examples

plateFile <- system.file("EnVisionExample/XXX_1500.csv", package = "cellHTS2")
    onePlate <- getEnVisionRawData(plateFile)

   ## to get the cross talk corrected data:
   onePlate2 <- getEnVisionCrosstalkCorrectedData(plateFile)