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cghseg (version 1.0.5)

GCnorm<-: Replace slot GCnorm

Description

changes slot GCnorm of a CGHoptions object

Arguments

.Object

an object of the CGHoptions class

Value

None

Details

CGHo["GCnorm"] determines if the bias due to GC content should be removed from the data: "linear" for linear regression (degree 2) "none" for no correction

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)