cghseg (version 1.0.5)

getsegprofiles: getsegprofiles

Description

Extract segmented profiles from a CGHresults object

Usage

getsegprofiles(.Object)

Arguments

.Object

an object of the CGHresults class

Value

segprofiles

list of segmented profiles

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)

Examples

# NOT RUN {
set.seed(1)
simul          = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
CGHd           = new("CGHdata",Y=simul$Y)
CGHo           = new("CGHoptions")
calling(CGHo)  = FALSE
CGHr           = multiseg(CGHd,CGHo)
segprofiles    = getsegprofiles(CGHr)
# }