circlize (version 0.4.1)

get.current.chromosome: Get current chromosome name

Description

Get current chromosome name

Usage

get.current.chromosome()

Details

The function is same as get.current.sector.index and should only be put inside panel.fun when using circos.genomicTrackPlotRegion.

References

Gu, Z. (2014) circlize implements and enhances circular visualization in R. Bioinformatics.

Examples

# NOT RUN {
library(circlize)
circos.initializeWithIdeogram()
circos.genomicTrackPlotRegion(ylim = c(0, 1), panel.fun = function(region, value, ...) {
    print(get.current.chromosome())
})
circos.clear()
# }
# NOT RUN {
# }