clue (version 0.3-65)

cl_predict: Predict Memberships

Description

Predict class ids or memberships from R objects representing partitions.

Usage

cl_predict(object, newdata = NULL,
           type = c("class_ids", "memberships"), ...)

Value

Depending on type, an object of class "cl_class_ids"

with the predicted class ids, or of class "cl_membership" with the matrix of predicted membership values.

Arguments

object

an R object representing a partition of objects.

newdata

an optional data set giving the objects to make predictions for. This must be of the same “kind” as the data set employed for obtaining the partition. If omitted, the original data are used.

type

a character string indicating whether class ids or memberships should be returned. May be abbreviated.

...

arguments to be passed to and from methods.

Details

Many algorithms resulting in partitions of a given set of objects can be taken to induce a partition of the underlying feature space for the measurements on the objects, so that class memberships for “new” objects can be obtained from the induced partition. Examples include partitions based on assigning objects to their “closest” prototypes, or providing mixture models for the distribution of objects in feature space.

This is a generic function. The methods provided in package clue handle the partitions obtained from clustering functions in the base R distribution, as well as packages RWeka, cba, cclust, cluster, e1071, flexclust, flexmix, kernlab, mclust, movMF and skmeans (and of course, clue itself).

Examples

## Run kmeans on a random subset of the Cassini data, and predict the
## memberships for the "test" data set.
data("Cassini")
nr <- NROW(Cassini$x)
ind <- sample(nr, 0.9 * nr, replace = FALSE)
party <- kmeans(Cassini$x[ind, ], 3)
table(cl_predict(party, Cassini$x[-ind, ]),
      Cassini$classes[-ind])