coRNAi (version 1.22.0)

cellHTS2df: converts cellHTS objects to dataframes

Description

converts a cellHTS2 object into a data.frame object and check that all mandatory meta data is included. Adds Directions, replicates and Pair columns.

Usage

cellHTS2df(x,neutral)

Arguments

x

a cellHTS object with correct annotations

neutral

string stating which RNAi is neutral (negative control)

Value

data.frame, with the data from the cellHTS object in column "value". Meta data from annotation file and the new columns; Directions, Replicate and Pair

See Also

cellHTS

Examples

data(screen1_raw)
df = cellHTS2df(screen1_raw,neutral="Fluc")
head(df)