coRNAi (version 1.22.0)

updateDf: updates dataframe after fitting of main estimates

Description

adds residuals (value-main effects) to a dataframe

Usage

updateDf(df, lm, per=NULL)

Arguments

df

df dataframe created by cellHTS2df function

lm

lm lm objects, residuals from fitting main effects to data

per

per string argument, for which factor the analysis was done separetly, eg. replicate.

Value

data frame with a new column "residuals"

Examples

data(screen1_raw)
df = cellHTS2df(screen1_raw,neutral="Fluc")
df = weightDf(df,exclude=c("double","controlP1","controlP2","controlN1","controlN2","controlP1N1"))
lmain =lmmain(df)
df = updateDf(df,lmain)
hist(df$residuals)