+.coalmodelpart

Add a feature or parameter to a model

internal

Coalescent simulators can rapidly simulate biological sequences
evolving according to a given model of evolution.
You can use this package to specify such models, to conduct the simulations
and to calculate additional statistics from the results (Staab, Metzler,
2016 <doi:10.1093/bioinformatics/btw098>).
It relies on existing simulators for doing the simulation, and currently
supports the programs 'ms', 'msms' and 'scrm'. It also supports finite-sites
mutation models by combining the simulators with the program 'seq-gen'.
Coala provides functions for calculating certain summary statistics, which
can also be applied to actual biological data.
One possibility to import data is through the 'PopGenome' package
(<https://github.com/pievos101/PopGenome>).

Dirk Metzler

coala

A Framework for Coalescent Simulation

Paul Staab

Jorge E. Amaya Romero

+.coalmodelpart function

<dl><dt>e1</dt>
<dd>The Model to which the feature/parameter should be added</dd>
<dt>e2</dt>
<dd>The feature/parameter to add</dd></dl>

Arguments

Add a feature or parameter to a model — +.coalmodelpart

<dl>

<dt>e1</dt>
<dd>The Model to which the feature/parameter should be added</dd>


<dt>e2</dt>
<dd>The feature/parameter to add</dd>

</dl>

+.coalmodelpart: Add a feature or parameter to a model

Description

Usage

Value

Arguments