Learn R Programming

coala (version 0.7.2)

conv_to_ms_arg.growth: Generate command line arguments for features

Description

These functions are exported only for technical reasons (because they are S3 methods) and are not intended for users.

Usage

# S3 method for growth
conv_to_ms_arg(feature, model)

# S3 method for growth conv_to_msms_arg(feature, model)

# S3 method for growth conv_to_scrm_arg(feature, model)

# S3 method for growth conv_to_seqgen_arg(feature, model)

# S3 method for ign_singletons conv_to_ms_arg(feature, model)

# S3 method for ign_singletons conv_to_msms_arg(feature, model)

# S3 method for ign_singletons conv_to_scrm_arg(feature, model)

# S3 method for ign_singletons conv_to_seqgen_arg(feature, model)

# S3 method for migration conv_to_ms_arg(feature, model)

# S3 method for migration conv_to_msms_arg(feature, model)

# S3 method for migration conv_to_scrm_arg(feature, model)

# S3 method for migration conv_to_seqgen_arg(feature, model)

# S3 method for mutation conv_to_ms_arg(feature, model)

# S3 method for mutation conv_to_msms_arg(feature, model)

# S3 method for mutation conv_to_scrm_arg(feature, model)

# S3 method for mutation conv_to_seqgen_arg(feature, model)

# S3 method for outgroup conv_to_ms_arg(feature, model)

# S3 method for outgroup conv_to_msms_arg(feature, model)

# S3 method for outgroup conv_to_scrm_arg(feature, model)

# S3 method for outgroup conv_to_seqgen_arg(feature, model)

# S3 method for pop_merge conv_to_ms_arg(feature, model)

# S3 method for pop_merge conv_to_msms_arg(feature, model)

# S3 method for pop_merge conv_to_scrm_arg(feature, model)

# S3 method for pop_merge conv_to_seqgen_arg(feature, model)

# S3 method for recombination conv_to_ms_arg(feature, model)

# S3 method for recombination conv_to_msms_arg(feature, model)

# S3 method for recombination conv_to_scrm_arg(feature, model)

# S3 method for recombination conv_to_seqgen_arg(feature, model)

# S3 method for sample conv_to_ms_arg(feature, model)

# S3 method for sample conv_to_msms_arg(feature, model)

# S3 method for sample conv_to_scrm_arg(feature, model)

# S3 method for sample conv_to_seqgen_arg(feature, model)

# S3 method for selection conv_to_ms_arg(feature, model)

# S3 method for selection conv_to_scrm_arg(feature, model)

# S3 method for selection conv_to_msms_arg(feature, model)

# S3 method for selection conv_to_seqgen_arg(feature, model)

# S3 method for size_change conv_to_ms_arg(feature, model)

# S3 method for size_change conv_to_msms_arg(feature, model)

# S3 method for size_change conv_to_scrm_arg(feature, model)

# S3 method for size_change conv_to_seqgen_arg(feature, model)

# S3 method for seg_sites_feat conv_to_ms_arg(feature, model)

# S3 method for seg_sites_feat conv_to_msms_arg(feature, model)

# S3 method for seg_sites_feat conv_to_scrm_arg(feature, model)

# S3 method for seg_sites_feat conv_to_seqgen_arg(feature, model)

# S3 method for trees_feat conv_to_ms_arg(feature, model)

# S3 method for trees_feat conv_to_msms_arg(feature, model)

# S3 method for trees_feat conv_to_scrm_arg(feature, model)

# S3 method for trees_feat conv_to_seqgen_arg(feature, model)

# S3 method for files_feat conv_to_ms_arg(feature, model)

# S3 method for files_feat conv_to_msms_arg(feature, model)

# S3 method for files_feat conv_to_scrm_arg(feature, model)

# S3 method for files_feat conv_to_seqgen_arg(feature, model)

# S3 method for unphased conv_to_ms_arg(feature, model)

# S3 method for unphased conv_to_msms_arg(feature, model)

# S3 method for unphased conv_to_scrm_arg(feature, model)

# S3 method for unphased conv_to_seqgen_arg(feature, model)

conv_to_ms_arg(feature, model)

# S3 method for default conv_to_ms_arg(feature, model)

# S3 method for default conv_to_msms_arg(feature, model)

# S3 method for default conv_to_scrm_arg(feature, model)

# S3 method for default conv_to_seqgen_arg(feature, model)

Arguments

feature

The feature for which the argument is generated

model

The complete model for which the argument is generated

Methods (by class)

  • conv_to_ms_arg(growth): Feature conversion

  • conv_to_ms_arg(ign_singletons): Feature conversion

  • conv_to_ms_arg(migration): Feature conversion

  • conv_to_ms_arg(mutation): Feature conversion

  • conv_to_ms_arg(outgroup): Feature conversion

  • conv_to_ms_arg(pop_merge): Feature conversion

  • conv_to_ms_arg(recombination): Feature conversion

  • conv_to_ms_arg(sample): Feature conversion

  • conv_to_ms_arg(selection): Feature conversion

  • conv_to_ms_arg(size_change): Feature conversion

  • conv_to_ms_arg(seg_sites_feat): Feature conversion

  • conv_to_ms_arg(trees_feat): Feature conversion

  • conv_to_ms_arg(files_feat): Feature conversion

  • conv_to_ms_arg(unphased): Feature conversion

  • conv_to_ms_arg(default): Feature conversion

Functions

  • conv_to_msms_arg(growth): Feature conversion

  • conv_to_scrm_arg(growth): Feature conversion

  • conv_to_seqgen_arg(growth): Feature conversion

  • conv_to_msms_arg(ign_singletons): Feature conversion

  • conv_to_scrm_arg(ign_singletons): Feature conversion

  • conv_to_seqgen_arg(ign_singletons): Feature conversion

  • conv_to_msms_arg(migration): Feature conversion

  • conv_to_scrm_arg(migration): Feature conversion

  • conv_to_seqgen_arg(migration): Feature conversion

  • conv_to_msms_arg(mutation): Feature conversion

  • conv_to_scrm_arg(mutation): Feature conversion

  • conv_to_seqgen_arg(mutation): Feature conversion

  • conv_to_msms_arg(outgroup): Feature conversion

  • conv_to_scrm_arg(outgroup): Feature conversion

  • conv_to_seqgen_arg(outgroup): Feature conversion

  • conv_to_msms_arg(pop_merge): Feature conversion

  • conv_to_scrm_arg(pop_merge): Feature conversion

  • conv_to_seqgen_arg(pop_merge): Feature conversion

  • conv_to_msms_arg(recombination): Feature conversion

  • conv_to_scrm_arg(recombination): Feature conversion

  • conv_to_seqgen_arg(recombination): Feature conversion

  • conv_to_msms_arg(sample): Feature conversion

  • conv_to_scrm_arg(sample): Feature conversion

  • conv_to_seqgen_arg(sample): Feature conversion

  • conv_to_scrm_arg(selection): Feature conversion

  • conv_to_msms_arg(selection): Feature conversion

  • conv_to_seqgen_arg(selection): Feature conversion

  • conv_to_msms_arg(size_change): Feature conversion

  • conv_to_scrm_arg(size_change): Feature conversion

  • conv_to_seqgen_arg(size_change): Feature conversion

  • conv_to_msms_arg(seg_sites_feat): Feature conversion

  • conv_to_scrm_arg(seg_sites_feat): Feature conversion

  • conv_to_seqgen_arg(seg_sites_feat): Feature conversion

  • conv_to_msms_arg(trees_feat): Feature conversion

  • conv_to_scrm_arg(trees_feat): Feature conversion

  • conv_to_seqgen_arg(trees_feat): Feature conversion

  • conv_to_msms_arg(files_feat): Feature conversion

  • conv_to_scrm_arg(files_feat): Feature conversion

  • conv_to_seqgen_arg(files_feat): Feature conversion

  • conv_to_msms_arg(unphased): Feature conversion

  • conv_to_scrm_arg(unphased): Feature conversion

  • conv_to_seqgen_arg(unphased): Feature conversion

  • conv_to_msms_arg(default): Feature conversion

  • conv_to_scrm_arg(default): Feature conversion

  • conv_to_seqgen_arg(default): Feature conversion