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coda (version 0.19-3)

plot.mcmc: Summary plots of mcmc objects

Description

plot.mcmc summarizes an mcmc or mcmc.list object with a trace of the sampled output and a density estimate for each variable in the chain.

Usage

# S3 method for mcmc
plot(x, trace = TRUE, density = TRUE, smooth = FALSE, bwf,
	auto.layout = TRUE, ask = dev.interactive(), …)

Arguments

x

an object of class mcmc or mcmc.list

trace

Plot trace of each variable

density

Plot density estimate of each variable

smooth

Draw a smooth line through trace plots

bwf

Bandwidth function for density plots

auto.layout

Automatically generate output format

ask

Prompt user before each page of plots

…

Further arguments

See Also

densplot, traceplot.