codelink (version 1.40.2)

cutCV: Calculate cutoff based in CV.

Description

Takes a Codelink object and calculate cutoff based in CV.

Usage

cutCV(object, subset=c(1:dim(object)[2]))

Arguments

object

an object of class "Codelink".

subset

subset of arrays to calculate cutoff with

Details

First it computes the median of CV for each gene over all arrays. Then it computes the mean and sd of all medians. Finally:

cutoff = mean + 3 * sd

Examples

## Not run: 
#     # data: Normalized Codelink object merged.
#     cutoff <- cutCV(data)
# ## End(Not run)