codelink (version 1.40.2)

mergeArray: Merge Codelink Bioarrays Data

Description

Merge data in a Codelink Object corresponding to same samples. Need a vector indicating the classes and an optional vector indicating the labels of the mer- ged samples.

Usage

mergeArray(object, class, names=NULL, method="mean", log.it=FALSE, merge.snr=TRUE)

Arguments

object

an object of class "Codelink".

class

a numeric vector indicating the classes.

names

an optional character vector indicating labels for each class.

method

the method used to summarize. Currently only "mean" supported.

log.it

logical; a logical indicating if log2 values should be returned.

merge.snr

logical; a logical indicating if SNR values should be merged.

Value

Examples

## Not run: 
# 	data(codelink.example)
# 	codelink.example <- bkgdCorrect(codelink.example)
# 	codelink.example <- normalize(codelink.example, log.it = FALSE)
# 	codelink.example <- mergeArray(codelink.example, class = c(1,1),
# 					names = "SAMPLE", log.it = TRUE)
# ## End(Not run)