coloc functions need to be able to link summary stats from two different datasets and they do this through snp identifiers. This function takes the output of susie_rss() and adds snp identifiers. It is entirely the user's responsibility to ensure snp identifiers are in the correct order, coloc cannot make any sanity checks.
annotate_susie(res, snp, LD)
res with column names added to some components
output of susie_rss()
vector of snp identifiers
matrix of LD (r) between snps in snp identifiers. Columns, rows should be named by a string that exists in the vector snp
Chris Wallace
Note: this annotation step is not needed if you use runsusie() - this is only required if you use the susieR functions directly