estgeno.1.ctl

estgeno.1.cse

Estimate single snp frequency distibutions

Performs the colocalisation tests described in
Giambartolomei et al (2013) <doi:10.1371/journal.pgen.1004383>,
Wallace (2020) <doi:10.1371/journal.pgen.1008720>,
Wallace (2021) <doi:10.1371/journal.pgen.1009440>.

Chris Wallace

coloc

Colocalisation Tests of Two Genetic Traits

Claudia Giambartolomei

Vincent Plagnol

estgeno.1.ctl function

<dl><dt>f</dt>
<dd>MAF</dd>
<dt>G0</dt>
<dd>single snp frequency in controls (vector of length 3) -
obtained from estgeno.1.ctl</dd>
<dt>b</dt>
<dd>log odds ratio</dd></dl>

Arguments

Author

estgeno1 — estgeno.1.ctl

<dl>

<dt>f</dt>
<dd>MAF</dd>


<dt>G0</dt>
<dd>single snp frequency in controls (vector of length 3) -
obtained from estgeno.1.ctl</dd>


<dt>b</dt>
<dd>log odds ratio</dd>

</dl>

estgeno.1.ctl: estgeno1

Description

Usage

Value

Arguments

Author

See Also