Internal compareGroups functions
chisq.test2(obj, chisq.test.perm)
combn2(x)
compare.i(x, y, selec.i, method.i, timemax.i, alpha, min.dis, max.xlev, varname, Q1, Q3,
groups, simplify, Xext, ref, fact.ratio, ref.y, p.corrected, compute.ratio,
include.miss, oddsratio.method, chisq.test.perm, byrow)
descripSurv(x, y, timemax)
descrip(x, y, method, Q1, Q3)
flip(x)
format2(x, digits = NULL, ...)
formula.compareGroups(x, ...)
logrank.pval(x,y)
signifdec.i(x, digits)
signifdec(x, digits)
summ.i(x)
table.i(x, hide.i, digits, digits.ratio, type, varname, hide.i.no, digits.p, sd.type,
q.type)
update.formula2(old, new)
simplify.formula(form)
KMg.plot(x, y, file, var.label.x, var.label.y, ...)
Cox.plot(x, y, file, var.label.x, var.label.y, ...)
bar2.plot(x, y, file, var.label.x, var.label.y, ...)
box.plot(x, y, file, var.label.x, var.label.y, ...)
KM.plot(x, file, var.label.x, ...)
bar.plot(x, file, var.label.x, ...)
norm.plot(x, file, var.label.x, z, n.breaks, ...)
prepare(x, nmax, header.labels)
snpQC(X, sep, verbose)These are not to be called by the user