SNP_Effects_Drug

A list of single nucleotide polymorphisms (SNPs) relevant to drug activity or
 metabolism, and the effects these may have on pharmacological activity.
 SNP effects in the patient may require close monitoring, an increase or
 decrease in dose, or a change in therapy.

datasets

Provides different datasets parsed from 'Drugbank'
<https://www.drugbank.ca/covid-19> database using 'dbparser' package.
It is a smaller version from 'dbdataset' package. It contains only information
about COVID-19 possible treatment.

Mohammed Ali

covid19dbcand

Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in
R Format

SNP_Effects_Drug function

a tibble with 9 variables:<dl class="dl-horizontal">
 <dt>protein-name</dt><dd>Proteins involved in this SNP.</dd>
 <dt>gene-symbol</dt><dd>Genes involved in this SNP.</dd>
 <dt>uniprot-id	</dt><dd><a href="https://www.uniprot.org/">Universal Protein
 Resource (UniProt)</a> identifiers for
 proteins involved in this pathway.</dd>
 <dt>rs-id</dt><dd>The <a href="https://www.ncbi.nlm.nih.gov/projects/SNP/">SNP
 Database</a> identifier for this single nucleotide polymorphism.</dd>
 <dt>allele</dt><dd>The alleles associated with the identified SNP.</dd>
 <dt>defining-change</dt><dd>A written description of the SNP effects.</dd>
 <dt>pubmed-id</dt><dd>Reference to <a href="https://www.ncbi.nlm.nih.gov">
 PubMed</a> article</dd>
 <dt>description</dt><dd>A written description of the SNP effects</dd>
 <dt>parent_key</dt><dd>drugbank id</dd>
</dl>

Format

Drug SNP Effects — SNP_Effects_Drug

a tibble with 9 variables:<dl class='dl-horizontal'>
 <dt>protein-name</dt><dd>Proteins involved in this SNP.</dd>
 <dt>gene-symbol</dt><dd>Genes involved in this SNP.</dd>
 <dt>uniprot-id	</dt><dd><a href='https://www.uniprot.org/'>Universal Protein
 Resource (UniProt)</a> identifiers for
 proteins involved in this pathway.</dd>
 <dt>rs-id</dt><dd>The <a href='https://www.ncbi.nlm.nih.gov/projects/SNP/'>SNP
 Database</a> identifier for this single nucleotide polymorphism.</dd>
 <dt>allele</dt><dd>The alleles associated with the identified SNP.</dd>
 <dt>defining-change</dt><dd>A written description of the SNP effects.</dd>
 <dt>pubmed-id</dt><dd>Reference to <a href='https://www.ncbi.nlm.nih.gov'>
 PubMed</a> article</dd>
 <dt>description</dt><dd>A written description of the SNP effects</dd>
 <dt>parent_key</dt><dd>drugbank id</dd>
</dl>

SNP_Effects_Drug: Drug SNP Effects

Description

Usage

Arguments

Format

Details