basic.qc

Create quality control plots, used in the examples of CTL mapping.

print

Identification and network inference of genetic loci associated
with correlation changes in quantitative traits (called correlated trait loci, CTLs).
Arends et al. (2016) <doi:10.21105/joss.00087>.

Danny Arends

Correlated Trait Locus Mapping

basic.qc function

<dl> <dt>genotypes</dt>
<dd>Matrix of genotypes. (individuals x markers)</dd> <dt>phenotypes</dt>
<dd>Matrix of phenotypes. (individuals x phenotypes)</dd> <dt>map_info</dt>
<dd>Matrix of genetic map information</dd></dl>

Arguments

Danny Arends <a href="/link/Danny.Arends%40gmail.com?package=ctl&version=1.0.0-10" data-mini-rdoc="ctl::Danny.Arends@gmail.com">Danny.Arends@gmail.com</a> 
 Maintainer: Danny Arends <a href="/link/Danny.Arends%40gmail.com?package=ctl&version=1.0.0-10" data-mini-rdoc="ctl::Danny.Arends@gmail.com">Danny.Arends@gmail.com</a>

Author

Create quality control plots. — basic.qc

<dl>

 <dt>genotypes</dt>
<dd>Matrix of genotypes. (individuals x markers)</dd>

 <dt>phenotypes</dt>
<dd>Matrix of phenotypes. (individuals x phenotypes)</dd>

 <dt>map_info</dt>
<dd>Matrix of genetic map information</dd>

</dl>

Danny Arends <a href='mailto:Danny.Arends@gmail.com'>Danny.Arends@gmail.com</a> 
 Maintainer: Danny Arends <a href='mailto:Danny.Arends@gmail.com'>Danny.Arends@gmail.com</a>

basic.qc: Create quality control plots.

Description

Usage

Value

Arguments

Author

Details

References

See Also

Examples