dartR.base (version 1.0.5)

gl.print.history: Prints history of a genlight object

Description

Prints history of a genlight object

Usage

gl.print.history(x = NULL, history = NULL)

Value

Prints a table with all history records. Currently the style cannot be changed.

Arguments

x

A genlight object (with history) [optional].

history

Either a link to a history slot (gl\@other$history), or a vector indicating which part of the history of x is used [c(1,3,4) uses the first, third and forth entry from x\@other$history]. If no history is provided the complete history of x is used (recreating the identical object x) [optional].

Author

Bernd Gruber (bugs? Post to https://groups.google.com/d/forum/dartr)

See Also

Other environment: gl.check.verbosity(), gl.check.wd(), gl.set.wd(), theme_dartR()

Examples

# \donttest{
dartfile <- system.file('extdata','testset_SNPs_2Row.csv', package='dartR.data')
metadata <- system.file('extdata','testset_metadata.csv', package='dartR.data')
gl <- gl.read.dart(dartfile, ind.metafile = metadata, probar=FALSE)
gl2 <- gl.filter.callrate(gl, method='loc', threshold=0.9)
gl3 <- gl.filter.callrate(gl2, method='ind', threshold=0.95)
gl.print.history(gl3)
# }