data.tree (version 0.2.0-3)

GetPhyloNr: Determine the number a Node has after conversion to a phylo object

Description

Use this function when plotting a Node as a phylo, e.g. to set custom labels to plot.

Usage

GetPhyloNr(x, type = c("node", "edge"))

Arguments

x

The Node

type

Either "node" (the default) or "edge" (to get the number of the edge from x to its parent)

Value

an integer representing the node

See Also

Other ape phylo conversions: as.Node.phylo; as.phylo.Node

Examples

# NOT RUN {
library(ape)
library(data.tree)
data(acme)
ap <- as.phylo(acme)
plot(ap)
nodelabels("IT Dep.", GetPhyloNr(acme$Climb("IT")))
edgelabels("Good!", GetPhyloNr(acme$Climb("IT", "Switch to R"), "edge"))
# }