getDir

Other parameters passed to <code><a rd-options="" href="/link/dir.create?package=ddCt&version=1.28.0" data-mini-rdoc="ddCt::dir.create">dir.create</a></code>


  <code>getDir</code> creates a directory in case it does not exist and
  returns the directory name.


The Delta-Delta-Ct (ddCt) Algorithm is an approximation method to determine relative gene expression with quantitative real-time PCR (qRT-PCR) experiments. Compared to other approaches, it requires no standard curve for each primer-target pair, therefore reducing the working load and yet returning accurate enough results as long as the assumptions of the amplification efficiency hold. The ddCt package implements a pipeline to collect, analyse and visualize qRT-PCR results, for example those from TaqMan SDM software, mainly using the ddCt method. The pipeline can be either invoked by a script in command-line or through the API consisting of S4-Classes, methods and functions.

Jitao David Zhang

ddCt

The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR)

getDir function

Other parameters passed to <code><a href="dir.create" rd-options="">dir.create</a></code>

<code>getDir</code> creates a directory in case it does not exist and
  returns the directory name.

getDir: Auxillary functions for the executive scripts

Description

Usage

Arguments

Value

Details

Examples