Calculate the correlation between the distance matrices in high and low dimensioal space.
# S4 method for dimRedResult
cophenetic_correlation(object, d = stats::dist, cor_method = "pearson")
of class dimRedResult
the distance function to use.
The correlation method.
Other Quality scores for dimensionality reduction:
AUC_lnK_R_NX,dimRedResult-method
,
LCMC,dimRedResult-method
,
Q_NX,dimRedResult-method
,
Q_global,dimRedResult-method
,
Q_local,dimRedResult-method
,
R_NX,dimRedResult-method
,
distance_correlation,dimRedResult-method
,
mean_R_NX,dimRedResult-method
,
plot_R_NX()
,
quality,dimRedResult-method
,
reconstruction_error,dimRedResult-method
,
reconstruction_rmse,dimRedResult-method
,
total_correlation,dimRedResult-method