diseasemapping (version 2.0.6)

Modelling Spatial Variation in Disease Risk for Areal Data

Description

Formatting of population and case data, calculation of Standardized Incidence Ratios, and fitting the BYM model using 'INLA'. For details see Brown (2015) .

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Version

Install

install.packages('diseasemapping')

Monthly Downloads

567

Version

2.0.6

License

GPL

Maintainer

Patrick Brown

Last Published

February 9th, 2024

Functions in diseasemapping (2.0.6)

formatPopulation-methods

Format a population data set

bym-methods

Fit the BYM model

getStdRate

Calculate the standardized rate

getBreaks

Age Breaks

cancerRates

Download cancer incidence rates from the International Agency for Research on Cancer (IARC)

nbToInlaGraph

Write a graph file for INLA

getRates

Calculate the estimated coefficients of age and sex group from the glm model

diseasemapping-package

Disease Mapping

getSMR-methods

Calculate the standardized mortality/morbidity ratios

formatCases

Format the disease case data set

inla.models

Valid models in INLA

kentucky

Larynx cancer cases and population in Kentucky

casedata

Data set contains the number of cases information

popdata

Ontario 2006 population by census subdivision

referencepop

Standard Canadian population data set from year 1991.